Genera Cellulatum Home / List of Genera
Classification of Bacteria Phylum Classification
Takashi Nakada
04 December 2012
Kingdom Subkingdom Infrakingdom Phylum Class Subclass Order
Bacteria



















Bacteria



















Bacteria



















Bacteria



















Bacteria



















Bacteria
Negibacteria



















Negibacteria



















Negibacteria



















Negibacteria
Eobacteria Deinococci Deinococci Deinococcales
Thermales
Chloroflexi "Chloroflexi" "Chloroflexales"
"Herpetosiphonales"
Anaerolineae Anaerolineales
Caldilineae Caldilineales
Thermomicrobia Thermomicrobiales
Sphaerobacterales
Ktedonobacteria Ktedonobacterales
Thermogemmatisporales
Glycobacteria



















Glycobacteria



















Glycobacteria



















Glycobacteria
Cyanobacteria Gloeobacterophyceae Gloeobacterales
Nostocophyceae "Synechococcophycidae" "Synechococcales"
Nostocophycidae Chroococcales
Oscillatoriales
Nostocales
Incertae sedis "Pseudanabaenales"
Spirochaetes Spirochaetes Spirochaetales
Fibrobacteres Fibrobacteria Fibrobacterales
Gemmatimonadetes Gemmatimonadetes Gemmatimonadales
Chlorobi Chlorobea Chlorobiales
Ignavibacteria Ignavibacteriales
Bacteroidetes Bacteroidia Bacteroidales
Flavobacteriia Flavobacteriales
Sphingobacteriia Sphingobacteriales
Cytophagia Cytophagales
Planctomycetes Planctomycea Planctomycetales
Phycisphaerae Phycisphaerales
Chlamydiae Chlamydiae Chlamydiales
Verrucomicrobia Verrucomicrobiae Verrucomicrobiales
Opitutae Opitutales
Puniceicoccales
"Spartobacteria" "Chthoniobacterales"
Lentisphaerae Lentisphaeria Lentisphaerales
Victivallales
Proteobacteria



















Proteobacteria
Alphaproteobacteria Rhodospirillales
Rickettsiales
Rhodobacterales
Sphingomonadales
Caulobacterales
Rhizobiales
"Parvularculales"
Kordiimonadales
Sneathiellales
Kiloniellales
Betaproteobacteria Burkholderiales
Hydrogenophilales
Methylophilales
Neisseriales
Nitrosomonadales
Rhodocyclales
"Procabacteriales"
Gammaproteobacteria Chromatiales
Acidithiobacillales
Xanthomonadales
Cardiobacteriales
Thiotrichales
Legionellales
Methylococcales
Oceanospirillales
Pseudomonadales
Alteromonadales
"Vibrionales"
Aeromonadales
"Enterobacteriales"
Pasteurellales
Deltaproteobacteria Desulfurellales
Desulfovibrionales
Desulfobacterales
Desulfarculales
Desulfuromonadales
Syntrophobacterales
Bdellovibrionales
Myxococcales
Epsilonproteobacteria Campylobacterales
Nautiliales
Acidobacteria Acidobacteria Acidobacteriales
Holophagae Holophagales
Acanthopleuribacterales
Aquificae Aquificae Aquificales
Deferribacteres Deferribacteres Geovibriales
Thermodesulfobacteria Thermodesulfobacteria Thermodesulfobacteriales
Nitrospirae "Nitrospira" "Nitrospirales"
Fusobacteria Fusobacteriia Fusobacteriales
Synergistetes Synergistia Synergistales
Caldiserica Caldisericia Caldisericales
Incertae sedis Elusimicrobia Elusimicrobia Elusimicrobiales
Armatimonadetes Armatimonadia Armatimonadales
Chthonomonadetes Chthonomonadales
Fimbriimonadia Fimbriimonadales
Posibacteria Thermotogae Thermotogae Thermotagales
Firmicutes Bacilli Bacillales
Lactobacillales
Clostridia Clostridiales
Halanaerobiales
Thermoanaerobacterales
Natranaerobiales
Erysipelotrichia Erysipelotrichales
Thermolithobacteria Thermolithobacterales
Negativicutes Selenomonadales
Tenericutes Mollicutes Mycoplasmatales
Entomoplasmatales
Acholeplasmatales
Anaeroplasmatales
Actinobacteria Actinobacteria Actinomycetales
"Actinopolysporales"
Bifidobacteriales
"Catenulisporales"
"Corynebacteriales"
"Frankiales"
"Glycomycetales"
"Jiangellales"
"Kineosporiales"
Micrococcales
"Micromonosporales"
"Propionibacteriales"
"Pseudonocardiales"
"Streptomycetales"
"Streptosporangiales"
"Acidimicrobiia" Acidimicrobiales
"Coriobacteriia" Coriobacteriales
"Nitriliruptoria" Nitriliruptorales
Euzebyales
"Rubrobacteria" Rubrobacterales
"Thermoleophilia" Thermoleophilales
Solirubrobacterales
Gaiellales
Dictyoglomi Dictyoglomia Dictyoglomales
Incertae sedis Chrysiogenetes Chrysiogenetes Chrysiogenales
Incertae sedis Haloplasmatales

References

Albuquerque, L. et al. Gaiella occulta gen. nov., sp. nov., a novel representative of a deep branching phylogenetic lineage within the class Actinobacteria and proposal of Gaiellaceae fam. nov. and Gaiellales ord. nov. Syst. Appl. Microbiol. 34, 595-599 (2011).

Antunes, A. et al. A new lineage of halophilic, wall-less, contractile bacteria from a brine-filled deep of the Red Sea. J. Bacteriol. 190, 3580-3587 (2008).

Cavaletti, L. et al. New lineage of filamentous, spore-forming, gram-positive bacteria from soil. Appl. Environ. Microbiol. 72, 4360-4369 (2006).

Cavalier-Smith, T. Kingdom Protozoa and its 18 phyla. Microbiol. Rev. 57, 953-994 (1993).

Cavalier-Smith, T. The neomuran origin of archaebacteria, the negibacterial root of the universal tree and bacterial megaclassification. Int. J. Syst. Evol. Microbiol. 52, 7-76 (2002).

Cavalier-Smith, T. Rooting the tree of life by transition analyses. Biol. Direct 1, 19 (2006).

Cho, J.-C., Vergin, K. L., Morris, R. M. & Giovannoni, S. J. Lentisphaera araneosa gen. nov., sp. nov, a transparent exopolymer producing marine bacterium, and the description of a novel bacterial phylum, Lentisphaerae. Environ. Microbiol. 6, 611-621 (2004).

Cho, Y.-J., Lee, K., Song, J. & Cho, J.-C. Puniceicoccus vermicola gen. nov., sp. nov., a novel marine bacterium, and description of Puniceicoccaceae fam. nov., Puniceicoccales ord. nov., Opitutaceae fam. nov., Opitutales ord. nov. and Opitutae classis nov. in the phylum 'Verrucomicrobia'. Int. J. Syst. Evol. Microbiol. 57, 532-537 (2007).

Fukunaga, Y., Kurahashi, M., Yanagi, K., Yokota, A. & Harayama, S. Acanthopleuribacter pedis gen. nov., sp. nov., a marine bacterium isolated from a chiton, and description of Acanthopleuribacteraceae fam. nov., Acanthopleuribacterales ord. nov., Holophagaceae fam. nov., Holophagales ord. nov. and Holophagae classis nov. in the phylum ‘Acidobacteria’. Int. J. Syst. Evol. Microbiol. 58, 2597-2601 (2008).

Fukunaga, Y. et al. Phycisphaera mikurensis gen. nov., sp. nov., isolated from a marine alga, and proposal of Phycisphaeraceae fam. nov., Phycisphaerales ord. nov. and Phycisphaerae classis nov. in the phylum Planctomycetes. J. Gen. Appl. Microbiol. 55, 267-275 (2009).

Garrity, G. M., Bell, J. A. & Lilburn, T. in Bergey's Manual of Systematic Bacteriology, 2nd Edn, Vol. 2. (eds. Brenner, D. J., Krieg, N. R. & Staley, J. T.) 159-220 (Springer-Verlag, New York, 2005).

Geissinger, O., Herlemann, D. P. R., Mörschel, E., Maier, U. G. & Brune, A. The ultramicrobacterium “Elusimicrobium minutum” gen. nov., sp. nov., the first cultivated representative of the Termite Group 1 phylum. Appl. Environ. Microbiol. 75, 2831-2840 (2009).

Hoffmann, L., Komárek, J. & Kaštovský, J. System of cyanoprokaryotes (cyanobacteria) - state in 2004. Arch. Hydrobiol. Suppl. Algol. Stud. 117, 95-115 (2005).

Hugenholtz, P. & Stackebrandt, E. Reclassification of Sphaerobacter thermophilus from the subclass Sphaerobacteridae in the phylum Actinobacteria to the class Thermomicrobia (emended description) in the phylum Chloroflexi (emended description). Int. J. Syst. Evol. Microbiol. 54, 2049-2051 (2004).

Iino, T. et al. Ignavibacterium album gen. nov., sp. nov., a moderately thermophilic anaerobic bacterium isolated from microbial mats at a terrestrial hot spring and proposal of Ignavibacteria classis nov., for a novel lineage at the periphery of green sulfur bacteria. Int. J. Syst. Evol. Microbiol. 60, 1376-1382 (2010).

Im, W.-T. et al. Description of Fimbriimonas ginsengisoli gen. nov., sp. nov. within the Fimbriimonadia class nov., of the phylum Armatimonadetes. Antonie van Leeuwenhoek 102, 307-317 (2012).

Jumas-Bilak, E., Roudière, L. & Marchandin, H. Description of ‘Synergistetes’ phyl. nov. and emended description of the phylum ‘Deferribacteres’ and of the family Syntrophomonadaceae, phylum ‘Firmicutes’. Int. J. Syst. Evol. Microbiol. 59, 1028-1035 (2009).

Kurahashi, M., Fukunaga, Y., Harayama, S. & Yokota, A. Sneathiella glossodoripedis sp. nov., a marine alphaproteobacterium isolated from the nudibranch Glossodoris cincta, and proposal of Sneathiellales ord. nov. and Sneathiellaceae fam. nov. Int. J. Syst. Evol. Microbiol. 58, 548-552 (2008).

Kurahashi, M., Fukunaga, Y., Sakiyama, Y., Harayama, S. & Yokota, A. Euzebya tangerina gen. nov., sp. nov., a deeply branching marine actinobacterium isolated from the sea cucumber Holothuria edulis, and proposal of Euzebyaceae fam. nov., Euzebyales ord. nov. and Nitriliruptoridae subclassis nov. Int. J. Syst. Evol. Microbiol. 60, 2314-2319 (2010).

Lee, K. C.-Y. et al. Chthonomonas calidirosea gen. nov., sp. nov., an aerobic, pigmented, thermophilic micro-organism of a novel bacterial class, Chthonomonadetes classis nov., of the newly described phylum Armatimonadetes originally designated candidate division OP10. Int. J. Syst. Evol. Microbiol. 61, 2482-2490 (2011).

Ludwig, W., Schleifer, K.-H. & Whitman, W. B. in Bergey's Manual of Systematic Bacteriology, 2nd Edn, Vol. 3, The Firmicutes (eds. De Vos, P. et al.) 15-17 (Springer, Dordrecht, 2009).

Ludwig, W., Euzéby, J. & Whitman, W. B. in Bergey's Manual of Systematic Bacteriology, 2nd Edn, Vol. 4, The Bacteroidetes, Spirochaetes, Tenericutes (Mollicutes), Acidobacteria, Fibrobacteres, Fusobacteria, Dictyoglomi, Gemmatimonadetes, Lentisphaerae, Verrucomicrobia, Chlamydiae, and Planctomycetes (eds. Krieg, N. R. et al.) 1-19 (Springer, New York, 2011).

Ludwig, W. et al. in Bergey's Manual of Systematic Bacteriology, 2nd Edn, Vol. 5, The Actinobacteria, Part A (eds. Goodfellow, M. et al.) 1-31 (Springer, New York, 2012).

Marchandin, H. et al. Negativicoccus succinicivorans gen. nov., sp. nov., isolated from human clinical samples, emended description of the family Veillonellaceae and description of Negativicutes classis nov., Selenomonadales ord. nov. and Acidaminococcaceae fam. nov. in the bacterial phylum Firmicutes. Int. J. Syst. Evol. Microbiol. 60, 1271-1279 (2010).

Margulis, L. & Schwartz, K. V. Five Kingdoms: an Illustrated Guide to the Phyla of Life on Earth. 3rd ed. (Henry Holt and Company, New York, 1998).

Marin, B., Nowack, E. C. M. & Melkonian, M. A plastid in the making: Evidence for a second primary endosymbiosis. Protist 156, 425-432 (2005).

Mesbah, N. M., Hedrick, D. B., Peacock, A. D., Rohde, M. & Wiegel, J. Natranaerobius thermophilus gen. nov., sp. nov., a halophilic, alkalithermophilic bacterium from soda lakes of the Wadi An Natrun, Egypt, and proposal of Natranaerobiaceae fam. nov. and Natranaerobiales ord. nov. Int. J. Syst. Evol. Microbiol. 57, 2507-2512 (2007).

Miroshnichenko, M. L. et al. Caminibacter profundus sp. nov., a novel thermophile of Nautiliales ord. nov. within the class 'Epsilonproteobacteria', isolated from a deep-sea hydrothermal vent. Int. J. Syst. Evol. Microbiol. 54, 41-45 (2004).

Mori, K., Yamaguchi, K., Sakiyama, Y., Urabe, T. & Suzuki, K. Caldisericum exile gen. nov., sp. nov., an anaerobic, thermophilic, filamentous bacterium of a novel bacterial phylum, Caldiserica phyl. nov., originally called the candidate phylum OP5, and description of Caldisericaceae fam. nov., Caldisericales ord. nov. and Caldisericia classis nov. Int. J. Syst. Evol. Microbiol. 59, 2894-2898 (2009).

Murray, R. G. E. in Bergey's Manual of Systematic Bacteriology, Vol. 1. (eds. Krieg, N. R. & Holt, J. G.) 31-34 (Williams and Wilkins, Baltimore, 1984).

Reddy, G. S. N. & Garcia-Pichel, F. Description of Patulibacter americanus sp. nov., isolated from biological soil crusts, emended description of the genus Patulibacter Takahashi et al. 2006 and proposal of Solirubrobacterales ord. nov. and Thermoleophilales ord. nov. Int. J. Syst. Evol. Microbiol. 59, 87-94 (2009).

Schleifer, K.-H. in Bergey's Manual of Systematic Bacteriology, 2nd Edn, Vol. 3, The Firmicutes (eds. De Vos, P. et al.) 19 (Springer, Dordrecht, 2009).

Sokolova, T. et al. Novel chemolithotrophic, thermophilic, anaerobic bacteria Thermolithobacter ferrireducens gen. nov., sp. nov. and Thermolithobacter carboxydivorans sp. nov. Extremophiles 11, 145-157 (2007).

Sorokin, D. Y., van Pelt, S., Tourova, T. P. & Evtushenko, L. I. Nitriliruptor alkaliphilus gen. nov., sp. nov., a deep-lineage haloalkaliphilic actinobacterium from soda lakes capable of growth on aliphatic nitriles, and proposal of Nitriliruptoraceae fam. nov. and Nitriliruptorales ord. nov. Int. J. Syst. Evol. Microbiol. 59, 248-253 (2009).

Tamaki, H. et al. Armatimonas rosea gen. nov., sp. nov., of a novel bacterial phylum, Armatimonadetes phyl. nov., formally called the candidate phylum OP10. Int. J. Syst. Evol. Microbiol. 61, 1442-1447 (2011).

Wiese, J., Thiel, V., Gärtner, A., Schmaljohann, R. & Imhoff, J. F. Kiloniella laminariae gen. nov., sp. nov., an alphaproteobacterium from the marine macroalga Laminaria saccharina. Int. J. Syst. Evol. Microbiol. 59, 350-356 (2009).

Yabe, S., Aiba, Y., Sakai, Y., Hazaka, M. & Yokota, A. Thermosporothrix hazakensis gen. nov., sp. nov., isolated from compost, description of Thermosporotrichaceae fam. nov. within the class Ktedonobacteria Cavaletti et al. 2007 and emended description of the class Ktedonobacteria. Int. J. Syst. Evol. Microbiol. 60, 1794-1801 (2010).

Yabe, S., Aiba, Y., Sakai, Y., Hazaka, M. & Yokota, A. Thermogemmatispora onikobensis gen. nov., sp. nov. and Thermogemmatispora foliorum sp. nov., isolated from fallen leaves on geothermal soils, and description of Thermogemmatisporaceae fam. nov. and Thermogemmatisporales ord. nov. within the class Ktedonobacteria. Int. J. Syst. Evol. Microbiol. 61, 903-910 (2011).

Yamada, T. et al. Anaerolinea thermolimosa sp. nov., Levilinea saccharolytica gen. nov., sp. nov. and Leptolinea tardivitalis gen. nov., sp. nov., novel filamentous anaerobes, and description of the new classes Anaerolineae classis nov. and Caldilineae classis nov. in the bacterial phylum Chloroflexi. Int. J. Syst. Evol. Microbiol. 56, 1331-1340 (2006).